Usage

• 1. LBM-Suite2p Quickstart
  • 1.1. Input data
  • 1.2. Process a single z-plane
  • 1.3. Process full volume
• 2. Cell Detection Parameters
  • 2.1. Parameters
  • 2.2. Defaults
  • 2.3. Threshold Scaling
  • 2.4. Max Overlap
  • 2.5. Spatial High-Pass Filter
  • 2.6. Tau
• 3. Function Demo: plot_traces
  • 3.1. Preparation
  • 3.2. Single neuron
  • 3.3. Two neurons with manual offset
  • 3.4. Default dff
  • 3.5. More neurons
  • 3.6. Temporal binning
• 4. Grid-Search
  • 4.1. Setup
  • 4.2. ROI Detection
  • 4.3. Registration Grid Search