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LBM-CaImAn-MATLAB  documentation - Home
  • MBO User Hub
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  • First Steps
    • 0.1. Project Setup
    • 0.2. Pipeline Usage
  • User Guide
    • 1. Assembly
    • 2. Registration
    • 3. Segmentation
    • 4. Axial Collation and Correction
    • 5. Tips and Tricks
    • 6. Troubleshooting
  • Tutorials
    • 1. Explained: Registration
    • 2. Explained: Source Extraction
    • 3. Explained: Axial Offset Correction
  • API
    • 1. Core Functions
    • 2. Utility Functions
    • 3. Internal Functions
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  • .md

API

API#

There are two forms of functions to know for this pipeline:

  1. Core functions used to run the pipeline

  2. Utility functions for interacting with pipeline outputs.

  3. Internals functions intended for the pipeline, not public use and thus not listed here.

  • 1. Core Functions
  • 2. Utility Functions
    • 2.1. Readers
    • 2.2. Writers
    • 2.3. Visualization
    • 2.4. Validation
  • 3. Internal Functions

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3. Explained: Axial Offset Correction

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1. Core

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