API

Python API provides helper functions for saving, loading, processing and visualizing mbo datasets.

1. Core functions required for processing mbo datasets.

2. I/O functions for loading and saving datasets.

3. Visualization functions for visualizing and saving visualizations.

• 1. Core Functions
  • read_scan()
  • get_metadata()
• 2. I/O Functions
  • save_as()
  • get_files()
  • npy_to_dask()
  • zstack_from_files()
• 3. Visualization Functions
  • save_mp4()
  • save_png()
  • run_gui()
• 4. Function Usage
  • 4.1. run_gui
    • Jupyter / IPython
    • Python script (non-Jupyter)