{ "cells": [ { "cell_type": "markdown", "metadata": {}, "source": [ "# Collate Planes\n", "\n", "In this notebook, we merge CNMF results across each of our z-planes." ] }, { "cell_type": "code", "execution_count": 9, "metadata": { "ExecuteTime": { "end_time": "2024-10-02T19:41:31.186070Z", "start_time": "2024-10-02T19:41:30.745070Z" }, "execution": { "iopub.execute_input": "2024-10-02T16:52:45.670096Z", "iopub.status.busy": "2024-10-02T16:52:45.669088Z", "iopub.status.idle": "2024-10-02T16:52:50.961938Z", "shell.execute_reply": "2024-10-02T16:52:50.961938Z", "shell.execute_reply.started": "2024-10-02T16:52:45.670096Z" } }, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "The autoreload extension is already loaded. To reload it, use:\n", " %reload_ext autoreload\n" ] } ], "source": [ "%gui qt\n", "import sys\n", "from pathlib import Path\n", "import os\n", "import numpy as np\n", "import zarr\n", "import napari\n", "\n", "import logging\n", "import lbm_caiman_python as lbm\n", "\n", "# Importing this WONT WORK withotu adding to the path\n", "sys.path.append('../..') # TODO: Take this out when we upload to pypi\n", "\n", "import pandas as pd\n", "import lbm_mc as mc\n", "from mesmerize_viz import *\n", "from lbm_mc.caiman_extensions.cnmf import cnmf_cache\n", "\n", "try:\n", " if __IPYTHON__:\n", " get_ipython().run_line_magic('load_ext', 'autoreload')\n", " get_ipython().run_line_magic('autoreload', '2')\n", "except NameError:\n", " pass\n", "try:\n", " import cv2\n", " cv2.setNumThreads(0)\n", "except():\n", " pass\n", "\n", "logging.basicConfig()\n", "\n", "os.environ[\"CONDA_PREFIX_1\"] = \"\"\n", "if os.name == \"nt\":\n", " # disable the cache on windows, this will be automatic in a future version\n", " cnmf_cache.set_maxsize(0)\n" ] }, { "cell_type": "code", "execution_count": 10, "metadata": { "ExecuteTime": { "end_time": "2024-10-02T19:41:33.327089Z", "start_time": "2024-10-02T19:41:33.126089Z" } }, "outputs": [], "source": [ "chan_order = (\n", " np.array(\n", " [\n", " 1,\n", " 5,\n", " 6,\n", " 7,\n", " 8,\n", " 9,\n", " 2,\n", " 10,\n", " 11,\n", " 12,\n", " 13,\n", " 14,\n", " 15,\n", " 16,\n", " 17,\n", " 3,\n", " 18,\n", " 19,\n", " 20,\n", " 21,\n", " 22,\n", " 23,\n", " 4,\n", " 24,\n", " 25,\n", " 26,\n", " 27,\n", " 28,\n", " ]\n", " )\n", " - 1\n", ")\n" ] }, { "cell_type": "code", "execution_count": 11, "metadata": { "ExecuteTime": { "end_time": "2024-10-02T19:41:33.579595Z", "start_time": "2024-10-02T19:41:33.330091Z" }, "execution": { "iopub.execute_input": "2024-10-02T16:56:21.060339Z", "iopub.status.busy": "2024-10-02T16:56:21.060339Z", "iopub.status.idle": "2024-10-02T16:56:21.259352Z", "shell.execute_reply": "2024-10-02T16:56:21.259352Z", "shell.execute_reply.started": "2024-10-02T16:56:21.060339Z" } }, "outputs": [ { "data": { "text/html": [ "
\n", " | algo | \n", "item_name | \n", "input_movie_path | \n", "params | \n", "outputs | \n", "added_time | \n", "ran_time | \n", "algo_duration | \n", "comments | \n", "uuid | \n", "
---|---|---|---|---|---|---|---|---|---|---|
0 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_1.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': faeb27e8-40b9-4e5a-ad... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T16:54:16 | \n", "946.94 sec | \n", "None | \n", "faeb27e8-40b9-4e5a-ad8c-b9cc73c03635 | \n", "
1 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_2.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 89b676c7-9480-47d7-b1... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T17:10:06 | \n", "949.6 sec | \n", "None | \n", "89b676c7-9480-47d7-b190-e4bbc2a5decc | \n", "
2 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_3.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': f03ead24-ab13-48e7-87... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T17:28:57 | \n", "1131.04 sec | \n", "None | \n", "f03ead24-ab13-48e7-87c0-27d5940a7c91 | \n", "
3 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_4.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 585a0fc2-40d4-45f2-ba... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T17:51:18 | \n", "1340.32 sec | \n", "None | \n", "585a0fc2-40d4-45f2-badf-ba13d5cc77a6 | \n", "
4 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_5.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 544c2a52-0b90-4b74-ba... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T18:08:22 | \n", "1024.35 sec | \n", "None | \n", "544c2a52-0b90-4b74-baae-b2ca913c7c2a | \n", "
5 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_6.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': d6c3f33c-2b90-4c6d-a4... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T18:24:00 | \n", "937.73 sec | \n", "None | \n", "d6c3f33c-2b90-4c6d-a4ad-f237dae5f73b | \n", "
6 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_7.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': ca269a68-06d0-4f96-b5... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T18:39:39 | \n", "939.58 sec | \n", "None | \n", "ca269a68-06d0-4f96-b508-87160fdf37ab | \n", "
7 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_8.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': a9cb2077-073a-4552-96... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T18:55:09 | \n", "929.57 sec | \n", "None | \n", "a9cb2077-073a-4552-9669-e53ba0c96803 | \n", "
8 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_9.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': c0205f69-ccb6-4304-9c... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T19:10:49 | \n", "940.35 sec | \n", "None | \n", "c0205f69-ccb6-4304-9cee-18af09d11663 | \n", "
9 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_10.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 1fac642d-6cef-4a68-94... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T19:28:15 | \n", "1045.02 sec | \n", "None | \n", "1fac642d-6cef-4a68-9415-737213b4462d | \n", "
10 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_11.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 97569a0f-b5c4-41b5-92... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T19:45:46 | \n", "1051.62 sec | \n", "None | \n", "97569a0f-b5c4-41b5-9268-b4ddeda9d740 | \n", "
11 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_12.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': c2d0864d-1313-4ded-8b... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T20:01:40 | \n", "953.4 sec | \n", "None | \n", "c2d0864d-1313-4ded-8b7f-4a7f02947b2d | \n", "
12 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_13.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 8301c084-fe7c-4e84-b8... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T20:17:40 | \n", "960.7 sec | \n", "None | \n", "8301c084-fe7c-4e84-b8d7-db6fcc8893ed | \n", "
13 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_14.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 1eabd9f9-1a57-4c08-a8... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T20:33:51 | \n", "970.13 sec | \n", "None | \n", "1eabd9f9-1a57-4c08-a830-9276371c00a9 | \n", "
14 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_15.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 25be7a5b-dd16-42cd-bd... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T20:52:06 | \n", "1095.19 sec | \n", "None | \n", "25be7a5b-dd16-42cd-bd4a-1312b4c6e791 | \n", "
15 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_16.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': f87dc096-6bb2-40dd-8d... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T21:08:23 | \n", "977.02 sec | \n", "None | \n", "f87dc096-6bb2-40dd-8dff-20f1362423b0 | \n", "
16 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_17.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 0e6f8223-3002-4430-a9... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T21:28:21 | \n", "1197.8 sec | \n", "None | \n", "0e6f8223-3002-4430-a987-d83a6d7c7bd8 | \n", "
17 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_18.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 52ab80e3-880f-4ae5-bd... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T21:46:45 | \n", "1104.12 sec | \n", "None | \n", "52ab80e3-880f-4ae5-bd38-711c0138ebe2 | \n", "
18 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_19.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 65c8dfa4-2a65-4618-82... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T22:05:32 | \n", "1126.88 sec | \n", "None | \n", "65c8dfa4-2a65-4618-8240-7f08fccce4ad | \n", "
19 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_20.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 473b088b-1b8e-4ecb-97... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T22:23:00 | \n", "1048.28 sec | \n", "None | \n", "473b088b-1b8e-4ecb-97e2-75eb299851b2 | \n", "
20 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_21.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 60d2fc66-20a9-4f00-b6... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T22:41:10 | \n", "1090.04 sec | \n", "None | \n", "60d2fc66-20a9-4f00-b6f7-b9e80440efe7 | \n", "
21 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_22.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 8926526d-cc18-47e2-b5... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T23:01:26 | \n", "1215.23 sec | \n", "None | \n", "8926526d-cc18-47e2-b599-1496b2c9f03e | \n", "
22 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_23.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': f2b1c811-e02a-4058-a1... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T23:20:00 | \n", "1114.08 sec | \n", "None | \n", "f2b1c811-e02a-4058-a15b-861ee1128793 | \n", "
23 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_24.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 5c9bd42e-fb07-43f0-a1... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T23:38:35 | \n", "1114.86 sec | \n", "None | \n", "5c9bd42e-fb07-43f0-a18d-0b9e516db4ec | \n", "
24 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_25.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 84004c56-81c1-474b-ab... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T23:57:28 | \n", "1132.94 sec | \n", "None | \n", "84004c56-81c1-474b-ab38-327fbf79bf8c | \n", "
25 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_26.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 23521021-6791-4d41-85... | \n", "2024-10-01T16:34:44 | \n", "2024-10-02T00:14:28 | \n", "1019.75 sec | \n", "None | \n", "23521021-6791-4d41-855d-779eefce6840 | \n", "
26 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_27.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 07907a0b-b138-41e3-99... | \n", "2024-10-01T16:34:44 | \n", "2024-10-02T00:34:07 | \n", "1179.51 sec | \n", "None | \n", "07907a0b-b138-41e3-99a7-f7153738a640 | \n", "
27 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_28.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 8b7cbfb4-7c62-4780-a9... | \n", "2024-10-01T16:34:44 | \n", "2024-10-02T00:49:55 | \n", "947.96 sec | \n", "None | \n", "8b7cbfb4-7c62-4780-a90c-5275cbe1f318 | \n", "
\n", " | algo | \n", "item_name | \n", "input_movie_path | \n", "params | \n", "outputs | \n", "added_time | \n", "ran_time | \n", "algo_duration | \n", "comments | \n", "uuid | \n", "
---|---|---|---|---|---|---|---|---|---|---|
0 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_1.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': faeb27e8-40b9-4e5a-ad... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T16:54:16 | \n", "946.94 sec | \n", "None | \n", "faeb27e8-40b9-4e5a-ad8c-b9cc73c03635 | \n", "
1 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_2.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 89b676c7-9480-47d7-b1... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T17:10:06 | \n", "949.6 sec | \n", "None | \n", "89b676c7-9480-47d7-b190-e4bbc2a5decc | \n", "
2 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_3.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': f03ead24-ab13-48e7-87... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T17:28:57 | \n", "1131.04 sec | \n", "None | \n", "f03ead24-ab13-48e7-87c0-27d5940a7c91 | \n", "
3 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_4.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 585a0fc2-40d4-45f2-ba... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T17:51:18 | \n", "1340.32 sec | \n", "None | \n", "585a0fc2-40d4-45f2-badf-ba13d5cc77a6 | \n", "
4 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_5.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 544c2a52-0b90-4b74-ba... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T18:08:22 | \n", "1024.35 sec | \n", "None | \n", "544c2a52-0b90-4b74-baae-b2ca913c7c2a | \n", "
5 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_6.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': d6c3f33c-2b90-4c6d-a4... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T18:24:00 | \n", "937.73 sec | \n", "None | \n", "d6c3f33c-2b90-4c6d-a4ad-f237dae5f73b | \n", "
6 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_7.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': ca269a68-06d0-4f96-b5... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T18:39:39 | \n", "939.58 sec | \n", "None | \n", "ca269a68-06d0-4f96-b508-87160fdf37ab | \n", "
7 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_8.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': a9cb2077-073a-4552-96... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T18:55:09 | \n", "929.57 sec | \n", "None | \n", "a9cb2077-073a-4552-9669-e53ba0c96803 | \n", "
8 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_9.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': c0205f69-ccb6-4304-9c... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T19:10:49 | \n", "940.35 sec | \n", "None | \n", "c0205f69-ccb6-4304-9cee-18af09d11663 | \n", "
9 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_10.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 1fac642d-6cef-4a68-94... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T19:28:15 | \n", "1045.02 sec | \n", "None | \n", "1fac642d-6cef-4a68-9415-737213b4462d | \n", "
10 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_11.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 97569a0f-b5c4-41b5-92... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T19:45:46 | \n", "1051.62 sec | \n", "None | \n", "97569a0f-b5c4-41b5-9268-b4ddeda9d740 | \n", "
11 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_12.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': c2d0864d-1313-4ded-8b... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T20:01:40 | \n", "953.4 sec | \n", "None | \n", "c2d0864d-1313-4ded-8b7f-4a7f02947b2d | \n", "
12 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_13.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 8301c084-fe7c-4e84-b8... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T20:17:40 | \n", "960.7 sec | \n", "None | \n", "8301c084-fe7c-4e84-b8d7-db6fcc8893ed | \n", "
13 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_14.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 1eabd9f9-1a57-4c08-a8... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T20:33:51 | \n", "970.13 sec | \n", "None | \n", "1eabd9f9-1a57-4c08-a830-9276371c00a9 | \n", "
14 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_15.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 25be7a5b-dd16-42cd-bd... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T20:52:06 | \n", "1095.19 sec | \n", "None | \n", "25be7a5b-dd16-42cd-bd4a-1312b4c6e791 | \n", "
15 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_16.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': f87dc096-6bb2-40dd-8d... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T21:08:23 | \n", "977.02 sec | \n", "None | \n", "f87dc096-6bb2-40dd-8dff-20f1362423b0 | \n", "
16 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_17.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 0e6f8223-3002-4430-a9... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T21:28:21 | \n", "1197.8 sec | \n", "None | \n", "0e6f8223-3002-4430-a987-d83a6d7c7bd8 | \n", "
17 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_18.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 52ab80e3-880f-4ae5-bd... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T21:46:45 | \n", "1104.12 sec | \n", "None | \n", "52ab80e3-880f-4ae5-bd38-711c0138ebe2 | \n", "
18 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_19.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 65c8dfa4-2a65-4618-82... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T22:05:32 | \n", "1126.88 sec | \n", "None | \n", "65c8dfa4-2a65-4618-8240-7f08fccce4ad | \n", "
19 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_20.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 473b088b-1b8e-4ecb-97... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T22:23:00 | \n", "1048.28 sec | \n", "None | \n", "473b088b-1b8e-4ecb-97e2-75eb299851b2 | \n", "
20 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_21.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 60d2fc66-20a9-4f00-b6... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T22:41:10 | \n", "1090.04 sec | \n", "None | \n", "60d2fc66-20a9-4f00-b6f7-b9e80440efe7 | \n", "
21 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_22.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 8926526d-cc18-47e2-b5... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T23:01:26 | \n", "1215.23 sec | \n", "None | \n", "8926526d-cc18-47e2-b599-1496b2c9f03e | \n", "
22 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_23.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': f2b1c811-e02a-4058-a1... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T23:20:00 | \n", "1114.08 sec | \n", "None | \n", "f2b1c811-e02a-4058-a15b-861ee1128793 | \n", "
23 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_24.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 5c9bd42e-fb07-43f0-a1... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T23:38:35 | \n", "1114.86 sec | \n", "None | \n", "5c9bd42e-fb07-43f0-a18d-0b9e516db4ec | \n", "
24 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_25.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 84004c56-81c1-474b-ab... | \n", "2024-10-01T16:34:44 | \n", "2024-10-01T23:57:28 | \n", "1132.94 sec | \n", "None | \n", "84004c56-81c1-474b-ab38-327fbf79bf8c | \n", "
25 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_26.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 23521021-6791-4d41-85... | \n", "2024-10-01T16:34:44 | \n", "2024-10-02T00:14:28 | \n", "1019.75 sec | \n", "None | \n", "23521021-6791-4d41-855d-779eefce6840 | \n", "
26 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_27.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 07907a0b-b138-41e3-99... | \n", "2024-10-01T16:34:44 | \n", "2024-10-02T00:34:07 | \n", "1179.51 sec | \n", "None | \n", "07907a0b-b138-41e3-99a7-f7153738a640 | \n", "
27 | \n", "cnmf | \n", "cnmf_1 | \n", "tiff\\extracted_plane_28.tif | \n", "{'main': {'fr': 9.62, 'dxy': (1.0, 1.0), 'deca... | \n", "{'mean-projection-path': 8b7cbfb4-7c62-4780-a9... | \n", "2024-10-01T16:34:44 | \n", "2024-10-02T00:49:55 | \n", "947.96 sec | \n", "None | \n", "8b7cbfb4-7c62-4780-a90c-5275cbe1f318 | \n", "